Index

A

add_bonds() (in module metaboblend.build_structures)

annotate_msn() (in module metaboblend.build_structures)

B

build() (in module metaboblend.build_structures)

build_from_subsets() (in module metaboblend.build_structures)

C

calculate_complete_multipartite_graphs() (in module metaboblend.auxiliary) calculate_exact_mass() (in module metaboblend.databases) close() (metaboblend.databases.SubstructureDb method) combine_mfs() (in module metaboblend.build_structures)

create_compound_database() (metaboblend.databases.SubstructureDb method) create_connectivity_database() (in module metaboblend.databases) create_indexes() (metaboblend.databases.SubstructureDb method) create_substructure_database() (in module metaboblend.databases)

D

draw_subgraph() (in module metaboblend.auxiliary)

F

filter_hmdbid_substructures() (metaboblend.databases.SubstructureDb method)

filter_records() (in module metaboblend.databases)

G

gen_subs_table() (in module metaboblend.build_structures) generate_structures() (in module metaboblend.build_structures) generate_substructure_network() (metaboblend.databases.SubstructureDb method) get_bond_enthalpies() (in module metaboblend.build_structures) get_degrees() (in module metaboblend.auxiliary) get_elements() (in module metaboblend.databases)

get_sgs() (in module metaboblend.databases) get_single_edge() (metaboblend.databases.SubstructureDb method) get_substructure() (in module metaboblend.databases) get_substructure_bond_idx() (in module metaboblend.databases) get_substructure_network() (metaboblend.databases.SubstructureDb method) graph_info() (in module metaboblend.auxiliary) graph_to_ri() (in module metaboblend.auxiliary)

I

insert_substructure() (in module metaboblend.databases)

K

k_configs() (metaboblend.databases.SubstructureDb method)

M

metaboblend.auxiliary module metaboblend.build_structures module metaboblend.databases module

module metaboblend.auxiliary metaboblend.build_structures metaboblend.databases

P

paths() (metaboblend.databases.SubstructureDb method)

R

reindex_atoms() (in module metaboblend.build_structures)

S

select_compounds() (metaboblend.databases.SubstructureDb method) select_mass_values() (metaboblend.databases.SubstructureDb method) select_mfs() (metaboblend.databases.SubstructureDb method) select_substructures() (metaboblend.databases.SubstructureDb method)

sort_subgraphs() (in module metaboblend.auxiliary) subset_sgs_sizes() (in module metaboblend.databases) substructure_combination_build() (in module metaboblend.build_structures) SubstructureDb (class in metaboblend.databases)

U

update_substructure_database() (in module metaboblend.databases)